Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit alpha | DN590_09025 | Not Available | Positive | 1843775 - 1845316 | 55278.3 |
| f0f1 atp synthase subunit gamma | DN590_09030 | Not Available | Positive | 1845367 - 1846230 | 31577.3 |
| f0f1 atp synthase subunit beta | DN590_09035 | Not Available | Positive | 1846257 - 1847639 | 50257.5 |
| atp synthase epsilon chain | DN590_09040 | Not Available | Positive | 1847660 - 1848079 | 15059.3 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | DN590_09045 | Not Available | Positive | 1848751 - 1850121 | 49280.2 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | DN590_09050 | Not Available | Positive | 1850362 - 1852191 | 66800.3 |
| phosphate abc transporter substrate-binding protein psts | DN590_09055 | Not Available | Positive | 1852526 - 1853566 | 36850.5 |
| phosphate abc transporter permease pstc | DN590_09060 | Not Available | Positive | 1853710 - 1854669 | 34132.9 |
| phosphate abc transporter permease ptsa | DN590_09065 | Not Available | Positive | 1854669 - 1855559 | 32256.7 |
| phosphate abc transporter atp-binding protein pstb | DN590_09070 | Not Available | Positive | 1855606 - 1856379 | 29000.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

