Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate--ammonia ligase | DN590_08975 | Not Available | Negative | 1835452 - 1836444 | 36614.6 |
| transcriptional regulator asnc | DN590_08980 | Not Available | Positive | 1836596 - 1837054 | 16952.7 |
| fmn-binding protein mioc | DN590_08985 | Not Available | Positive | 1837143 - 1837592 | 16236.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DN590_08990 | Not Available | Positive | 1837965 - 1839854 | 69828.7 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DN590_08995 | Not Available | Positive | 1839957 - 1840580 | 23287.3 |
| f0f1 atp synthase subunit i | DN590_09000 | Not Available | Positive | 1841195 - 1841575 | 13708.8 |
| f0f1 atp synthase subunit a | DN590_09005 | Not Available | Positive | 1841583 - 1842398 | 30383.2 |
| atp synthase subunit c | DN590_09010 | Not Available | Positive | 1842445 - 1842684 | 8238.67 |
| atp synthase subunit b | DN590_09015 | Not Available | Positive | 1842744 - 1843214 | 17264.9 |
| f0f1 atp synthase subunit delta | DN590_09020 | Not Available | Positive | 1843229 - 1843762 | 19455.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

