Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DN590_08925 | Not Available | Positive | 1822838 - 1824265 | 51453.9 |
| transcriptional regulator rbsr | DN590_08930 | Not Available | Negative | 1824231 - 1825223 | 36613.2 |
| ribokinase | DN590_08935 | Not Available | Negative | 1825227 - 1826156 | 32077.1 |
| ribose abc transporter substrate-binding protein rbsb | DN590_08940 | Not Available | Negative | 1826298 - 1827188 | 30939.3 |
| ribose abc transporter permease | DN590_08945 | Not Available | Negative | 1827213 - 1828178 | 33355.9 |
| ribose abc transporter atp-binding protein rbsa | DN590_08950 | Not Available | Negative | 1828184 - 1829689 | 55112.3 |
| d-ribose pyranase | DN590_08955 | Not Available | Negative | 1829697 - 1830116 | 15298.4 |
| low affinity potassium transporter kup | DN590_08960 | Not Available | Negative | 1830309 - 1832177 | 69342.4 |
| atpase rava | DN590_08965 | Not Available | Positive | 1832507 - 1834003 | 56582.3 |
| atpase rava stimulator viaa | DN590_08970 | Not Available | Positive | 1833997 - 1835448 | 55966.9 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

