Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine abc transporter atp-binding subunit | DN590_08875 | Not Available | Negative | 1810986 - 1811753 | 27992.1 |
| taurine abc transporter substrate-binding protein | DN590_08880 | Not Available | Negative | 1811768 - 1812730 | 34284.8 |
| dna-binding response regulator | DN590_08885 | Not Available | Positive | 1813068 - 1813697 | 22836.6 |
| sensor histidine kinase | DN590_08890 | Not Available | Positive | 1813697 - 1815238 | 58156.6 |
| mfs transporter | DN590_08895 | Not Available | Positive | 1815324 - 1816628 | 47823.3 |
| hypothetical protein | DN590_08900 | Not Available | Positive | 1816625 - 1817656 | 37484.6 |
| iron abc transporter permease | DN590_08905 | Not Available | Positive | 1817725 - 1819803 | 76005.3 |
| fe(3+) ions import atp-binding protein fbpc | DN590_08910 | Not Available | Positive | 1819815 - 1820861 | 39061.1 |
| hypothetical protein | DN590_08915 | Not Available | Positive | 1821094 - 1821670 | 23187.6 |
| fadr family transcriptional regulator | DN590_08920 | Not Available | Positive | 1822132 - 1822836 | 26583.2 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

