Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_08725 | Not Available | Positive | 1779138 - 1779341 | 7129.8 |
| two-component system sensor histidine kinase phor | DN590_08730 | Not Available | Negative | 1779552 - 1780847 | 49658.2 |
| phosphate regulon transcriptional regulator phob | DN590_08735 | Not Available | Negative | 1780898 - 1781587 | 26505.0 |
| exonuclease subunit sbcd | DN590_08740 | Not Available | Positive | 1781778 - 1782980 | 44526.8 |
| exonuclease subunit sbcc | DN590_08745 | Not Available | Positive | 1782977 - 1786120 | 118427.0 |
| mfs transporter araj | DN590_08750 | Not Available | Positive | 1786313 - 1787485 | 41379.2 |
| fructokinase | DN590_08755 | Not Available | Negative | 1787513 - 1788421 | 32243.3 |
| recombination-associated protein rdgc | DN590_08760 | Not Available | Positive | 1788513 - 1789424 | 34103.5 |
| pyrimidine/purine nucleoside phosphorylase | DN590_08765 | Not Available | Negative | 1789475 - 1789759 | 10079.8 |
| arom protein | DN590_08770 | Not Available | Negative | 1789831 - 1790508 | 24787.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

