Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gpe familygtail protein | DN590_19185 | Not Available | Negative | 3882722 - 3882841 | 4440.25 |
| P2 gpe-like tail protein | DN590_19190 | Not Available | Negative | 3882856 - 3883158 | 10811.5 |
| Major tail tube protein | DN590_19195 | Not Available | Negative | 3883213 - 3883728 | 18791.4 |
| Tail sheath protein | DN590_19200 | Not Available | Negative | 3883738 - 3884910 | 42088.9 |
| Tail fiber assembly protein | DN590_19205 | Not Available | Negative | 3885044 - 3885472 | 15839.3 |
| Variable tail fiber protein | DN590_19210 | Not Available | Negative | 3885813 - 3886787 | 33537.2 |
| Tail protein i | DN590_19215 | Not Available | Negative | 3886784 - 3887389 | 22609.9 |
| Baseplate assembly protein j | DN590_19220 | Not Available | Negative | 3887382 - 3888290 | 32411.5 |
| Baseplate wedge subunit | DN590_19225 | Not Available | Negative | 3888277 - 3888636 | 12862.3 |
| Baseplate assembly protein v | DN590_19230 | Not Available | Negative | 3888633 - 3889211 | 20744.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

