Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna 4-thiouridine(8) synthase thii | DN590_08575 | Not Available | Negative | 1749809 - 1751257 | 54855.1 |
| exodeoxyribonuclease vii small subunit | DN590_08580 | Not Available | Positive | 1751454 - 1751696 | 8894.39 |
| (2e,6e)-farnesyl diphosphate synthase | DN590_08585 | Not Available | Positive | 1751697 - 1752596 | 32095.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DN590_08590 | Not Available | Positive | 1752621 - 1754483 | 67620.8 |
| aldo/keto reductase | DN590_08595 | Not Available | Positive | 1754540 - 1755514 | 36279.1 |
| phosphatidylglycerophosphatase a | DN590_08600 | Not Available | Negative | 1755614 - 1756132 | 19452.2 |
| thiamine-phosphate kinase | DN590_08605 | Not Available | Negative | 1756110 - 1757087 | 34887.4 |
| n utilization substance protein b | DN590_08610 | Not Available | Negative | 1757165 - 1757584 | 15689.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | DN590_08615 | Not Available | Negative | 1757604 - 1758074 | 16143.4 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | DN590_08620 | Not Available | Negative | 1758165 - 1759268 | 40143.3 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

