Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter permease/atp-binding protein | DN590_08420 | Not Available | Negative | 1718430 - 1720202 | 66176.7 |
| lrp/asnc family transcriptional regulator | DN590_08425 | Not Available | Negative | 1720247 - 1720807 | 21121.8 |
| plp-dependent cysteine synthase family protein | DN590_08430 | Not Available | Positive | 1720822 - 1721877 | 39093.4 |
| hmp-pp phosphatase | DN590_08435 | Not Available | Negative | 1721928 - 1722746 | 30230.4 |
| sgrr family transcriptional regulator | DN590_08445 | Not Available | Positive | 1722891 - 1724591 | 64639.5 |
| 7-cyano-7-deazaguanine synthase quec | DN590_08450 | Not Available | Positive | 1724657 - 1725352 | 25412.4 |
| thioesterase | DN590_08455 | Not Available | Negative | 1725458 - 1725856 | 15100.1 |
| hypothetical protein | DN590_08460 | Not Available | Negative | 1725963 - 1726337 | 12860.5 |
| peptidylprolyl isomerase | DN590_08465 | Not Available | Negative | 1726484 - 1728358 | 67919.2 |
| dna-binding protein hu-beta | DN590_08470 | Not Available | Negative | 1728627 - 1728899 | 9196.06 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

