Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmb | DN590_08265 | Not Available | Negative | 1694757 - 1695416 | 23515.3 |
| cytochrome c biogenesis heme-transporting atpase ccma | DN590_08270 | Not Available | Negative | 1695413 - 1696033 | 23213.8 |
| cytochrome c-type protein napc | DN590_08275 | Not Available | Negative | 1696054 - 1696656 | 23287.1 |
| nitrate reductase cytochrome c-type subunit | DN590_08280 | Not Available | Negative | 1696666 - 1697115 | 16358.5 |
| quinol dehydrogenase ferredoxin subunit naph | DN590_08285 | Not Available | Negative | 1697112 - 1697975 | 31702.1 |
| ferredoxin-type protein napg | DN590_08290 | Not Available | Negative | 1697962 - 1698657 | 25013.3 |
| nitrate reductase catalytic subunit napa | DN590_08295 | Not Available | Negative | 1698664 - 1701150 | 93095.2 |
| nitrate reductase | DN590_08300 | Not Available | Negative | 1701147 - 1701410 | 9532.17 |
| ferredoxin-type protein napf | DN590_08305 | Not Available | Negative | 1701400 - 1701891 | 18105.3 |
| ecotin | DN590_08310 | Not Available | Positive | 1702305 - 1702802 | 18416.1 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

