Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna,type:pro,anti_codon:ggg; | Not Available | Not Available | Positive | 2767002 - 2767083 | Not Available |
| tigr02646 family protein | DN590_13840 | Not Available | Negative | 2767216 - 2767947 | 27303.0 |
| Attr | Not Available | Not Available | Positive | 2767442 - 2767453 | Not Available |
| Hypothetical protein gp32 | DN590_13845 | Not Available | Negative | 2767947 - 2769572 | 61862.6 |
| Rna-directed dna polymerase | DN590_13850 | Not Available | Negative | 2769577 - 2770509 | 35327.1 |
| Hypothetical protein | DN590_19160 | Not Available | Positive | 3877290 - 3877772 | 17846.2 |
| Ogr/delta-like zinc finger family protein | DN590_19165 | Not Available | Negative | 3877799 - 3878017 | 7948.45 |
| Tail protein | DN590_19170 | Not Available | Negative | 3878085 - 3879185 | 40772.4 |
| P2 gpu-like tail protein | DN590_19175 | Not Available | Negative | 3879182 - 3879667 | 17807.6 |
| Tail tape measure protein | DN590_19180 | Not Available | Negative | 3879664 - 3882729 | 107983.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

