Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose/methyl galactoside abc transporter atp-binding protein mgla | DN590_07950 | Not Available | Negative | 1631765 - 1633285 | 56587.9 |
| galactose abc transporter substrate-binding protein | DN590_07955 | Not Available | Negative | 1633357 - 1634355 | 35818.7 |
| hth-type transcriptional regulator gals | DN590_07960 | Not Available | Negative | 1634649 - 1635674 | 36933.6 |
| hypothetical protein | DN590_07965 | Not Available | Negative | 1635819 - 1636976 | 43473.4 |
| gtp cyclohydrolase i fole | DN590_07970 | Not Available | Negative | 1636991 - 1637659 | 24879.1 |
| hypothetical protein | DN590_07975 | Not Available | Positive | 1637917 - 1638054 | 5080.97 |
| s-formylglutathione hydrolase | DN590_07980 | Not Available | Positive | 1637982 - 1638818 | 31190.8 |
| helix-turn-helix domain-containing protein | DN590_07985 | Not Available | Negative | 1638819 - 1639208 | 14490.3 |
| l-serine ammonia-lyase | DN590_07990 | Not Available | Negative | 1639186 - 1640568 | 49971.2 |
| phosphoserine phosphatase serb | DN590_07995 | Not Available | Positive | 1640785 - 1641672 | 33102.0 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

