Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_07695 | Not Available | Negative | 1584303 - 1584605 | 10899.8 |
| hypothetical protein | DN590_07700 | Not Available | Negative | 1584598 - 1584804 | 7951.47 |
| hypothetical protein | DN590_07705 | Not Available | Negative | 1584801 - 1585199 | 15399.2 |
| hypothetical protein | DN590_07710 | Not Available | Negative | 1585211 - 1585492 | 10879.8 |
| marr family transcriptional regulator | DN590_07715 | Not Available | Negative | 1585504 - 1586277 | 28899.4 |
| integrase | DN590_07720 | Not Available | Positive | 1588567 - 1589145 | 21577.8 |
| hypothetical protein | DN590_07725 | Not Available | Positive | 1589239 - 1589436 | 7632.93 |
| hypothetical protein | DN590_07730 | Not Available | Positive | 1589433 - 1589726 | 11321.0 |
| hypothetical protein | DN590_07735 | Not Available | Positive | 1589802 - 1590062 | 9800.1 |
| hypothetical protein | DN590_07740 | Not Available | Positive | 1590166 - 1590486 | 11090.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

