Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l9 | DN590_07385 | Not Available | Positive | 1518774 - 1519223 | 15774.9 |
| dmt family transporter | DN590_07390 | Not Available | Positive | 1519366 - 1520289 | 33139.1 |
| hypothetical protein | DN590_07395 | Not Available | Negative | 1520354 - 1520992 | 23177.6 |
| peptidylprolyl isomerase | DN590_07400 | Not Available | Positive | 1521173 - 1521832 | 23669.3 |
| d-serine/d-alanine/glycine transporter | DN590_07405 | Not Available | Positive | 1522141 - 1523550 | 51556.5 |
| iron-sulfur cluster repair protein ytfe | DN590_07410 | Not Available | Negative | 1523698 - 1524360 | 24930.2 |
| methyl-accepting chemotaxis protein ii | DN590_07415 | Not Available | Positive | 1524605 - 1526176 | 56016.5 |
| eama/rhat family transporter | DN590_07420 | Not Available | Negative | 1526245 - 1527210 | 34898.1 |
| arac family transcriptional regulator | DN590_07425 | Not Available | Negative | 1527287 - 1528111 | 31825.9 |
| nad(p)-dependent oxidoreductase | DN590_07430 | Not Available | Negative | 1528193 - 1529041 | 29057.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

