Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts ascorbate transporter subunit iia | DN590_07335 | Not Available | Positive | 1512182 - 1512649 | 17011.4 |
| 3-keto-l-gulonate-6-phosphate decarboxylase ulad | DN590_07340 | Not Available | Positive | 1512662 - 1513312 | 23595.4 |
| l-ribulose-5-phosphate 3-epimerase | DN590_07345 | Not Available | Positive | 1513322 - 1514176 | 32033.4 |
| l-ribulose-5-phosphate 4-epimerase | DN590_07350 | Not Available | Positive | 1514176 - 1514862 | 25309.1 |
| mfs transporter | DN590_07355 | Not Available | Negative | 1514925 - 1516118 | 42504.3 |
| duf1471 domain-containing protein | DN590_07360 | Not Available | Negative | 1516286 - 1516561 | 9972.71 |
| hypothetical protein | DN590_07365 | Not Available | Positive | 1516861 - 1517625 | 27484.6 |
| 30s ribosomal protein s6 | DN590_07370 | Not Available | Positive | 1517784 - 1518179 | 15160.8 |
| primosomal replication protein n | DN590_07375 | Not Available | Positive | 1518186 - 1518500 | 11329.7 |
| 30s ribosomal protein s18 | DN590_07380 | Not Available | Positive | 1518505 - 1518732 | 8986.94 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

