Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Head-tail connector protein | DN590_13735 | Not Available | Positive | 2750398 - 2750715 | 11823.1 |
| Gp9 | DN590_13740 | Not Available | Positive | 2750712 - 2751062 | 13120.7 |
| Gp10 | DN590_13745 | Not Available | Positive | 2751031 - 2751420 | 14600.8 |
| Gp11 | DN590_13750 | Not Available | Positive | 2751417 - 2751818 | 14918.2 |
| Major tail shaft subunit | DN590_13755 | Not Available | Positive | 2751852 - 2752334 | 16900.0 |
| Putative tail assembly chaperone | DN590_13760 | Not Available | Positive | 2752397 - 2752759 | 12976.7 |
| Putative tail assembly chaperone | DN590_13765 | Not Available | Positive | 2752780 - 2753007 | 8267.98 |
| Putative tail component | DN590_13770 | Not Available | Positive | 2753007 - 2756309 | 116090.0 |
| Putative minor tail protein | DN590_13775 | Not Available | Positive | 2756310 - 2756642 | 12721.1 |
| Putative bacteriophage minor tail protein | DN590_13780 | Not Available | Positive | 2756651 - 2757346 | 25350.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

