Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_07040 | Not Available | Positive | 1455669 - 1455986 | 11835.2 |
| Trna-phe | Not Available | Not Available | Positive | 1456069 - 1456144 | Not Available |
| transcriptional regulator | DN590_07050 | Not Available | Negative | 1456297 - 1456872 | 21816.2 |
| protein-disulfide reductase dsbd | DN590_07055 | Not Available | Negative | 1456909 - 1458618 | 61580.4 |
| divalent cation tolerance protein cuta | DN590_07060 | Not Available | Negative | 1458594 - 1458941 | 12828.4 |
| anaerobic c4-dicarboxylate transporter | DN590_07065 | Not Available | Negative | 1459070 - 1460371 | 45713.6 |
| aspartate ammonia-lyase | DN590_07070 | Not Available | Negative | 1460487 - 1461923 | 52212.1 |
| membrane protein fxsa | DN590_07075 | Not Available | Positive | 1462262 - 1462738 | 17667.2 |
| l-methionine/branched-chain amino acid transporter | DN590_07080 | Not Available | Negative | 1462788 - 1464053 | 45163.6 |
| co-chaperone groes | DN590_07085 | Not Available | Positive | 1464329 - 1464622 | 10318.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

