Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_06980 | Not Available | Positive | 1445930 - 1446652 | 26856.2 |
| sulfurtransferase complex subunit tusd | DN590_06985 | Not Available | Positive | 1446652 - 1447038 | 13838.4 |
| sulfurtransferase complex subunit tusc | DN590_06990 | Not Available | Positive | 1447038 - 1447397 | 13038.6 |
| sulfurtransferase complex subunit tusb | DN590_06995 | Not Available | Positive | 1447405 - 1447692 | 10762.9 |
| 30s ribosomal protein s12 | DN590_07000 | Not Available | Positive | 1447818 - 1448192 | 13753.9 |
| 30s ribosomal protein s7 | DN590_07005 | Not Available | Positive | 1448288 - 1448758 | 17646.4 |
| elongation factor g | DN590_07010 | Not Available | Positive | 1448855 - 1450969 | 77582.7 |
| elongation factor tu | DN590_07015 | Not Available | Positive | 1451039 - 1451300 | 9470.01 |
| sodium-independent anion transporter | DN590_07030 | Not Available | Positive | 1451926 - 1453647 | 61842.0 |
| fatty acid--coa ligase | DN590_07035 | Not Available | Negative | 1453958 - 1455619 | 61190.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

