Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative adenosine monophosphate-protein transferase fic | DN590_06870 | Not Available | Positive | 1427351 - 1427953 | 22881.3 |
| aminodeoxychorismate synthase component 2 | DN590_06875 | Not Available | Positive | 1427985 - 1428548 | 20755.0 |
| bifunctional succinylornithine transaminase/acetylornithine transaminase | DN590_06880 | Not Available | Positive | 1428634 - 1429851 | 43665.3 |
| hypothetical protein | DN590_06885 | Not Available | Negative | 1429921 - 1432008 | 79341.7 |
| camp-activated global transcriptional regulator crp | DN590_06890 | Not Available | Negative | 1432060 - 1432692 | 23657.9 |
| hypothetical protein | DN590_06900 | Not Available | Negative | 1432853 - 1433068 | 8158.48 |
| osmc family protein | DN590_06905 | Not Available | Positive | 1433001 - 1433408 | 14565.5 |
| phosphoribulokinase | DN590_06910 | Not Available | Negative | 1433502 - 1434371 | 32401.9 |
| yheu family protein | DN590_06915 | Not Available | Negative | 1434425 - 1434643 | 8369.9 |
| hydrolase | DN590_06920 | Not Available | Negative | 1434640 - 1435662 | 38609.4 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

