Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | DN590_06770 | Not Available | Positive | 1402849 - 1403526 | 24621.8 |
| phosphoglycolate phosphatase | DN590_06775 | Not Available | Positive | 1403519 - 1404277 | 27318.6 |
| tryptophan--trna ligase | DN590_06780 | Not Available | Positive | 1404270 - 1405274 | 37459.0 |
| hypothetical protein | DN590_06785 | Not Available | Positive | 1405440 - 1406345 | 33537.5 |
| prd domain-containing protein | DN590_06790 | Not Available | Positive | 1406361 - 1406723 | 13594.6 |
| yhfx family plp-dependent enzyme | DN590_06795 | Not Available | Positive | 1406807 - 1407970 | 42616.1 |
| phosphopentomutase | DN590_06800 | Not Available | Positive | 1407970 - 1409196 | 43903.5 |
| phosphotriesterase-related protein | DN590_06805 | Not Available | Positive | 1409193 - 1410071 | 32996.6 |
| duf2620 domain-containing protein | DN590_06810 | Not Available | Positive | 1410082 - 1410435 | 12391.3 |
| hypothetical protein | DN590_06815 | Not Available | Positive | 1410447 - 1411751 | 46667.5 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

