Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | DN590_06670 | Not Available | Negative | 1380580 - 1381053 | 18556.1 |
| dna-binding response regulator | DN590_06675 | Not Available | Positive | 1381279 - 1381998 | 27355.3 |
| two-component system sensor histidine kinase envz | DN590_06680 | Not Available | Positive | 1381995 - 1383347 | 50448.3 |
| phosphoenolpyruvate carboxykinase (atp) | DN590_06685 | Not Available | Negative | 1383422 - 1385044 | 59826.7 |
| duf4153 domain-containing protein | DN590_06690 | Not Available | Positive | 1385423 - 1387141 | 64876.6 |
| hsp33 family molecular chaperone hslo | DN590_06695 | Not Available | Negative | 1387251 - 1388129 | 32318.2 |
| ribosome-associated heat shock protein hsp15 | DN590_06700 | Not Available | Negative | 1388154 - 1388555 | 15514.7 |
| gmp/imp nucleotidase | DN590_06705 | Not Available | Negative | 1388566 - 1389234 | 25291.0 |
| intracellular growth attenuator protein igaa | DN590_06710 | Not Available | Negative | 1389297 - 1391432 | 79129.9 |
| adp compounds hydrolase nude | DN590_06715 | Not Available | Positive | 1391755 - 1392315 | 21158.5 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

