Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltodextrin phosphorylase | DN590_06615 | Not Available | Positive | 1365732 - 1368125 | 90182.9 |
| 4-alpha-glucanotransferase | DN590_06620 | Not Available | Positive | 1368135 - 1370222 | 78070.4 |
| gluconate transporter | DN590_06625 | Not Available | Negative | 1370310 - 1371626 | 45853.5 |
| iron-sulfur cluster biogenesis protein nfua | DN590_06630 | Not Available | Negative | 1371996 - 1372571 | 20936.8 |
| dna utilization protein gntx | DN590_06635 | Not Available | Negative | 1372630 - 1373313 | 25570.7 |
| pimeloyl-[acyl-carrier protein] methyl ester esterase | DN590_06640 | Not Available | Positive | 1373351 - 1374121 | 28302.4 |
| ferrous iron transporter c | DN590_06650 | Not Available | Negative | 1374903 - 1375139 | 8710.72 |
| fe(2+) transporter permease subunit feob | DN590_06655 | Not Available | Negative | 1375151 - 1377469 | 84178.2 |
| ferrous iron transporter a | DN590_06660 | Not Available | Negative | 1377488 - 1377715 | 8325.28 |
| rna-binding transcriptional accessory protein | DN590_06665 | Not Available | Negative | 1378148 - 1380481 | 85217.8 |
Pathways
1213 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

