Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1,4-alpha-glucan branching enzyme | DN590_06565 | Not Available | Positive | 1349160 - 1351343 | 83984.1 |
| glycogen debranching enzyme | DN590_06570 | Not Available | Positive | 1351343 - 1353319 | 73730.4 |
| glucose-1-phosphate adenylyltransferase | DN590_06575 | Not Available | Positive | 1353334 - 1354629 | 48615.4 |
| glycogen synthase glga | DN590_06580 | Not Available | Positive | 1354629 - 1356062 | 52889.6 |
| glycogen phosphorylase | DN590_06585 | Not Available | Positive | 1356082 - 1358529 | 93273.8 |
| glycerol-3-phosphate dehydrogenase | DN590_06590 | Not Available | Negative | 1358620 - 1360128 | 57025.1 |
| thiosulfate sulfurtransferase glpe | DN590_06595 | Not Available | Positive | 1360327 - 1360653 | 12050.9 |
| rhomboid protease glpg | DN590_06600 | Not Available | Positive | 1360729 - 1361562 | 31312.4 |
| deor/glpr family transcriptional regulator | DN590_06605 | Not Available | Positive | 1361608 - 1362366 | 27916.5 |
| hth-type transcriptional regulator malt | DN590_06610 | Not Available | Negative | 1362408 - 1365113 | 103049.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

