Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high-affinity branched-chain amino acid abc transporter permease livm | DN590_06455 | Not Available | Positive | 1328445 - 1329722 | 46395.2 |
| abc transporter atp-binding protein | DN590_06460 | Not Available | Positive | 1329719 - 1330486 | 28379.7 |
| high-affinity branched-chain amino acid abc transporter atp-binding protein livf | DN590_06465 | Not Available | Positive | 1330504 - 1331217 | 26263.8 |
| hypothetical protein | DN590_06470 | Not Available | Positive | 1331318 - 1331599 | 10862.7 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | DN590_06475 | Not Available | Positive | 1331847 - 1333163 | 48268.1 |
| sn-glycerol-3-phosphate abc transporter permease ugpa | DN590_06480 | Not Available | Positive | 1333274 - 1334161 | 33100.6 |
| sn-glycerol-3-phosphate abc transporter permease ugpe | DN590_06485 | Not Available | Positive | 1334158 - 1335003 | 31531.9 |
| sn-glycerol-3-phosphate import atp-binding protein ugpc | DN590_06490 | Not Available | Positive | 1335005 - 1336075 | 39398.1 |
| glycerophosphodiester phosphodiesterase | DN590_06495 | Not Available | Positive | 1336072 - 1336815 | 27390.8 |
| duf2756 family protein | DN590_06500 | Not Available | Negative | 1336812 - 1337252 | 16460.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

