Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | DN590_06355 | Not Available | Negative | 1306121 - 1307743 | 59343.7 |
| tonb-dependent receptor | DN590_06360 | Not Available | Positive | 1308140 - 1310227 | 76301.5 |
| permease | DN590_06365 | Not Available | Negative | 1310830 - 1311876 | 38371.5 |
| mfs transporter | DN590_06370 | Not Available | Positive | 1312010 - 1313227 | 42124.1 |
| duf1795 domain-containing protein | DN590_06375 | Not Available | Negative | 1313231 - 1313788 | 19645.4 |
| 7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporter | DN590_06380 | Not Available | Negative | 1313861 - 1314526 | 25309.4 |
| sulfurtransferase tusa | DN590_06385 | Not Available | Positive | 1314695 - 1314940 | 9100.01 |
| zinc/cadmium/mercury/lead-transporting atpase | DN590_06390 | Not Available | Negative | 1315039 - 1317237 | 76915.7 |
| lysoplasmalogenase | DN590_06395 | Not Available | Negative | 1317312 - 1317938 | 23565.8 |
| duf2500 domain-containing protein | DN590_06400 | Not Available | Positive | 1318080 - 1318439 | 13578.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

