Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DN590_06205 | Not Available | Negative | 1281680 - 1282030 | 12365.8 |
| hypothetical protein | DN590_06210 | Not Available | Negative | 1282041 - 1282283 | 8709.27 |
| mipa/ompv family protein | DN590_06215 | Not Available | Negative | 1282857 - 1283603 | 27790.2 |
| prka family serine protein kinase | DN590_06220 | Not Available | Positive | 1284037 - 1285971 | 74481.3 |
| yeah/yhbh family protein | DN590_06225 | Not Available | Positive | 1286093 - 1287376 | 49389.0 |
| hemerythrin domain-containing protein | DN590_06230 | Not Available | Negative | 1287462 - 1287872 | 15874.0 |
| sam-dependent methyltransferase | DN590_06235 | Not Available | Negative | 1287886 - 1288656 | 28391.4 |
| diguanylate cylase | DN590_06240 | Not Available | Positive | 1288821 - 1290311 | 57048.6 |
| ybak/prolyl-trna synthetase associated domain-containing protein | DN590_06245 | Not Available | Positive | 1290356 - 1290859 | 17903.6 |
| duf441 domain-containing protein | DN590_06250 | Not Available | Positive | 1290999 - 1291445 | 15289.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

