Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Holin | DN590_13635 | Not Available | Positive | 2737781 - 2738059 | 10119.2 |
| Lysin | DN590_13640 | Not Available | Positive | 2738031 - 2738579 | 19755.9 |
| Phage-tail assembly-like protein | DN590_13645 | Not Available | Positive | 2738558 - 2739082 | 18875.2 |
| Hypothetical protein | DN590_13650 | Not Available | Positive | 2739079 - 2739306 | 8113.46 |
| Hypothetical protein | DN590_13655 | Not Available | Positive | 2739697 - 2739894 | 7150.23 |
| Phage-tail assembly-like protein | DN590_13660 | Not Available | Positive | 2739923 - 2740087 | 6284.5 |
| Csp | DN590_13665 | Not Available | Positive | 2740466 - 2740678 | 7720.12 |
| cold-shock protein | DN590_13670 | Not Available | Positive | 2740689 - 2740877 | 7159.58 |
| hypothetical protein | DN590_13675 | Not Available | Positive | 2740951 - 2741181 | 8291.22 |
| addiction module toxin, gnsa/gnsb family | DN590_13680 | Not Available | Positive | 2741385 - 2741558 | 6632.12 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

