Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptide peptidase sppa | DN590_06100 | Not Available | Positive | 1260202 - 1262058 | 67058.9 |
| glxa family transcriptional regulator | DN590_06105 | Not Available | Negative | 1262093 - 1263160 | 39346.6 |
| eama/rhat family transporter | DN590_06110 | Not Available | Negative | 1263173 - 1264093 | 33010.9 |
| l-asparaginase 1 | DN590_06115 | Not Available | Positive | 1264295 - 1265311 | 36943.3 |
| bifunctional nicotinamidase/pyrazinamidase | DN590_06120 | Not Available | Positive | 1265320 - 1265964 | 23326.5 |
| mfs transporter | DN590_06125 | Not Available | Negative | 1266002 - 1267360 | 50042.8 |
| deor/glpr transcriptional regulator | DN590_06130 | Not Available | Negative | 1267501 - 1268259 | 28315.1 |
| aldo/keto reductase | DN590_06135 | Not Available | Negative | 1268396 - 1269379 | 36317.0 |
| sugar kinase | DN590_06140 | Not Available | Negative | 1269389 - 1270336 | 34162.1 |
| ketose-bisphosphate aldolase | DN590_06145 | Not Available | Negative | 1270341 - 1271177 | 30787.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

