Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pts n,n'-diacetylchitobiose transporter subunit iic | DN590_05935 | Not Available | Negative | 1232898 - 1234256 | 48430.0 |
| pts sugar transporter subunit iib | DN590_05940 | Not Available | Negative | 1234344 - 1234664 | 11381.2 |
| osmotically-inducible lipoprotein osme | DN590_05950 | Not Available | Negative | 1234963 - 1235304 | 12161.5 |
| nad(+) synthase | DN590_05955 | Not Available | Positive | 1235515 - 1236345 | 30403.2 |
| excinuclease cho | DN590_05960 | Not Available | Positive | 1236477 - 1237364 | 33201.1 |
| hypothetical protein | DN590_05965 | Not Available | Negative | 1237324 - 1237899 | 21460.7 |
| atp-independent periplasmic protein-refolding chaperone | DN590_05970 | Not Available | Negative | 1238253 - 1238738 | 18178.0 |
| succinylglutamate desuccinylase | DN590_05975 | Not Available | Negative | 1239088 - 1240053 | 36077.0 |
| n-succinylarginine dihydrolase | DN590_05980 | Not Available | Negative | 1240046 - 1241389 | 49571.7 |
| succinylglutamate-semialdehyde dehydrogenase | DN590_05985 | Not Available | Negative | 1241386 - 1242864 | 52761.9 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

