Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DN590_13585 | Not Available | Negative | 2730881 - 2731177 | 10941.5 |
| permease | DN590_13590 | Not Available | Positive | 2731278 - 2732369 | 38937.6 |
| Hypothetical protein | DN590_13595 | Not Available | Positive | 2732656 - 2732889 | 8799.44 |
| Hypothetical protein | DN590_13600 | Not Available | Positive | 2732935 - 2733180 | 9191.43 |
| Hypothetical protein | DN590_13605 | Not Available | Positive | 2733310 - 2733510 | 8059.46 |
| Rus holliday junction resolvase | DN590_13610 | Not Available | Positive | 2733513 - 2733872 | 13839.8 |
| Hypothetical protein | DN590_13615 | Not Available | Positive | 2733869 - 2734909 | 38725.0 |
| Late gene regulator q | DN590_13620 | Not Available | Positive | 2734927 - 2735757 | 30779.8 |
| hypothetical protein | DN590_13625 | Not Available | Positive | 2735770 - 2736507 | 27618.8 |
| hypothetical protein | DN590_13630 | Not Available | Positive | 2736798 - 2737607 | 30911.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

