Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase | DN590_05310 | Not Available | Positive | 1101598 - 1102800 | 43560.4 |
| dna-binding transcriptional repressor deor | DN590_05315 | Not Available | Negative | 1102846 - 1103604 | 28617.4 |
| undecaprenyl-diphosphate phosphatase | DN590_05320 | Not Available | Negative | 1103669 - 1104277 | 22851.4 |
| multidrug transporter mdfa | DN590_05325 | Not Available | Positive | 1104575 - 1105807 | 44231.6 |
| hypothetical protein | DN590_05330 | Not Available | Negative | 1106025 - 1106306 | 9737.77 |
| had family hydrolase | DN590_05335 | Not Available | Negative | 1106414 - 1107229 | 30593.0 |
| mfs transporter | DN590_05340 | Not Available | Negative | 1107229 - 1108437 | 42065.3 |
| tetr/acrr family transcriptional regulator | DN590_05345 | Not Available | Positive | 1108523 - 1109083 | 21211.8 |
| short-chain dehydrogenase | DN590_05350 | Not Available | Negative | 1109070 - 1109867 | 27080.8 |
| transporter | DN590_05355 | Not Available | Negative | 1110138 - 1111823 | 60146.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

