Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione abc transporter atp-binding protein gsia | DN590_05255 | Not Available | Positive | 1088228 - 1090099 | 69224.1 |
| glutathione abc transporter substrate-binding protein gsib | DN590_05260 | Not Available | Positive | 1090128 - 1091666 | 56527.0 |
| glutathione abc transporter permease gsic | DN590_05265 | Not Available | Positive | 1091713 - 1092633 | 34048.6 |
| glutathione abc transporter permease gsid | DN590_05270 | Not Available | Positive | 1092636 - 1093547 | 33292.3 |
| 30s ribosomal protein s12 methylthiotransferase rimo | DN590_05275 | Not Available | Negative | 1093640 - 1094947 | 48921.9 |
| glycine cleavage system protein t | DN590_05280 | Not Available | Positive | 1095167 - 1095364 | 7405.25 |
| glycogen phosphorylase | DN590_05285 | Not Available | Positive | 1095417 - 1097867 | 93585.6 |
| transcriptional regulator | DN590_05295 | Not Available | Positive | 1099054 - 1099437 | 14371.3 |
| pqq-dependent sugar dehydrogenase | DN590_05300 | Not Available | Positive | 1099540 - 1100637 | 40441.4 |
| glutathione s-transferase family protein | DN590_05305 | Not Available | Negative | 1100643 - 1101269 | 23535.1 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

