Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Prophage repressor | DN590_13535 | Not Available | Negative | 2723506 - 2723886 | 14464.3 |
| Puative prophage anti-repressor | DN590_13540 | Not Available | Positive | 2723992 - 2724204 | 7960.52 |
| Cii decision making protein | DN590_13545 | Not Available | Positive | 2724208 - 2724762 | 20040.2 |
| Hypothetical protein | DN590_13550 | Not Available | Positive | 2724811 - 2725881 | 38992.4 |
| Replication protein 14 | DN590_13555 | Not Available | Positive | 2725793 - 2726383 | 22637.2 |
| transcriptional regulator | DN590_13560 | Not Available | Positive | 2726507 - 2726860 | 13078.0 |
| arsenical resistance operon transcriptional repressor arsd | DN590_13565 | Not Available | Positive | 2726908 - 2727270 | 12932.7 |
| arsenical pump-driving atpase | DN590_13570 | Not Available | Positive | 2727288 - 2729039 | 63388.1 |
| arsenical efflux pump membrane protein arsb | DN590_13575 | Not Available | Positive | 2729086 - 2730375 | 45419.2 |
| arsenate reductase (glutaredoxin) | DN590_13580 | Not Available | Positive | 2730388 - 2730813 | 15686.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

