Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosynthesis protein b | DN590_05005 | Not Available | Positive | 1035722 - 1036234 | 18654.1 |
| cyclic pyranopterin monophosphate synthase moac | DN590_05010 | Not Available | Positive | 1036237 - 1036722 | 17416.2 |
| molybdopterin synthase sulfur carrier subunit | DN590_05015 | Not Available | Positive | 1036715 - 1036960 | 8766.49 |
| molybdopterin synthase catalytic subunit moae | DN590_05020 | Not Available | Positive | 1036962 - 1037414 | 16922.9 |
| bax inhibitor (bi)-1/ycca family protein | DN590_05025 | Not Available | Positive | 1037456 - 1038160 | 26046.6 |
| upf0104 family protein | DN590_05030 | Not Available | Negative | 1038233 - 1039195 | 36249.9 |
| cardiolipin synthase clsb | DN590_05035 | Not Available | Negative | 1039195 - 1040436 | 47581.1 |
| eep domain-containing protein | DN590_05040 | Not Available | Negative | 1040433 - 1041194 | 28864.6 |
| hypothetical protein | DN590_05045 | Not Available | Positive | 1041327 - 1041737 | 15400.6 |
| abc transporter permease | DN590_05050 | Not Available | Negative | 1041699 - 1042805 | 41492.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

