Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 992127 - 992202 | Not Available |
| quinolinate synthase | DN590_04800 | Not Available | Positive | 992639 - 993682 | 37779.5 |
| nicotinamide riboside transporter pnuc | DN590_04805 | Not Available | Positive | 993709 - 994428 | 26864.5 |
| cdf family zinc transporter zitb | DN590_04810 | Not Available | Negative | 994425 - 995366 | 34581.6 |
| hypothetical protein | DN590_04815 | Not Available | Negative | 995480 - 995854 | 12892.8 |
| 3-deoxy-7-phosphoheptulonate synthase arog | DN590_04820 | Not Available | Positive | 996172 - 997224 | 37797.3 |
| 2,3-diphosphoglycerate-dependent phosphoglycerate mutase | DN590_04825 | Not Available | Negative | 997333 - 998085 | 28436.7 |
| galactose-1-epimerase | DN590_04830 | Not Available | Negative | 998318 - 999358 | 38572.0 |
| galactokinase | DN590_04835 | Not Available | Negative | 999352 - 1000500 | 41399.3 |
| galactose-1-phosphate uridylyltransferase | DN590_04840 | Not Available | Negative | 1000504 - 1001550 | 39602.6 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

