Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DN590_04640 | Not Available | Negative | 968288 - 968914 | 23372.5 |
| 5'/3'-nucleotidase sure | DN590_04645 | Not Available | Negative | 968908 - 969669 | 27151.1 |
| trna pseudouridine(13) synthase trud | DN590_04650 | Not Available | Negative | 969650 - 970699 | 39273.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DN590_04655 | Not Available | Negative | 970696 - 971175 | 16868.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DN590_04660 | Not Available | Negative | 971231 - 971926 | 25104.1 |
| cell division protein ftsb | DN590_04665 | Not Available | Negative | 971945 - 972256 | 11594.7 |
| duf3561 family protein | DN590_04670 | Not Available | Negative | 972471 - 972794 | 11667.6 |
| adenylyl-sulfate kinase | DN590_04675 | Not Available | Negative | 972842 - 973447 | 22323.6 |
| sulfate adenylyltransferase subunit cysn | DN590_04680 | Not Available | Negative | 973447 - 974874 | 52407.5 |
| sulfate adenylyltransferase subunit cysd | DN590_04685 | Not Available | Negative | 974884 - 975792 | 35155.2 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

