Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | DN590_12440 | Not Available | Positive | 2521249 - 2521905 | 23881.6 |
| Exonuclease | DN590_12445 | Not Available | Positive | 2521929 - 2522591 | 25134.5 |
| Attr | Not Available | Not Available | Positive | 2530228 - 2530244 | Not Available |
| Hybrid sensor histidine kinase - response regulator | DN590_13505 | Not Available | Negative | 2717278 - 2717949 | 25475.6 |
| Attl | Not Available | Not Available | Positive | 2717774 - 2717785 | Not Available |
| Putative bacteriophage integrase | DN590_13510 | Not Available | Negative | 2718023 - 2719309 | 48310.6 |
| hypothetical protein | DN590_13515 | Not Available | Negative | 2719309 - 2719524 | 8384.05 |
| Rece | DN590_13520 | Not Available | Negative | 2719591 - 2722062 | 92547.7 |
| Hypothetical protein | DN590_13525 | Not Available | Negative | 2722204 - 2722530 | 11573.9 |
| hypothetical protein | DN590_13530 | Not Available | Positive | 2722816 - 2723130 | 12343.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

