Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase transcriptional regulator norr | DN590_04335 | Not Available | Negative | 889357 - 890877 | 55349.4 |
| anaerobic nitric oxide reductase flavorubredoxin | DN590_04345 | Not Available | Positive | 891069 - 892517 | 54293.2 |
| nadh:flavorubredoxin reductase norw | DN590_04350 | Not Available | Positive | 892514 - 893647 | 41174.9 |
| carbamoyltransferase hypf | DN590_04355 | Not Available | Negative | 893811 - 896051 | 81871.4 |
| electron transport protein hydn | DN590_04360 | Not Available | Negative | 896195 - 896740 | 19691.9 |
| laci family dna-binding transcriptional regulator | DN590_04365 | Not Available | Negative | 896886 - 897899 | 36718.2 |
| pts cellobiose/arbutin/salicin transporter subunit iibc | DN590_04370 | Not Available | Positive | 898164 - 899618 | 50947.9 |
| 6-phospho-beta-glucosidase | DN590_04375 | Not Available | Positive | 899641 - 901065 | 53742.6 |
| type i toxin-antitoxin system syme family toxin | DN590_04380 | Not Available | Positive | 901238 - 901477 | 8896.86 |
| hydrogenase maturation peptidase hyci | DN590_04385 | Not Available | Negative | 901534 - 902004 | 17054.4 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

