Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | DN590_04285 | Not Available | Negative | 881249 - 882313 | 38177.7 |
| nicotinamide-nucleotide amidase | DN590_04290 | Not Available | Negative | 882406 - 882903 | 17490.6 |
| murein transglycosylase b | DN590_04295 | Not Available | Negative | 883095 - 884174 | 39882.3 |
| pts glucitol/sorbitol transporter subunit iic | DN590_04300 | Not Available | Positive | 884439 - 885002 | 20555.6 |
| pts glucitol/sorbitol transporter subunit iib | DN590_04305 | Not Available | Positive | 884999 - 885970 | 33646.3 |
| pts glucitol/sorbitol transporter subunit iia | DN590_04310 | Not Available | Positive | 885984 - 886346 | 12936.4 |
| sorbitol-6-phosphate dehydrogenase | DN590_04315 | Not Available | Positive | 886364 - 887143 | 27791.4 |
| transcriptional regulator gutm | DN590_04320 | Not Available | Positive | 887199 - 887558 | 13008.1 |
| dna-binding transcriptional repressor | DN590_04325 | Not Available | Positive | 887629 - 888402 | 28189.8 |
| arabinose-5-phosphate isomerase gutq | DN590_04330 | Not Available | Positive | 888395 - 889360 | 34169.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

