Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deda family protein | DN590_04235 | Not Available | Negative | 875021 - 875449 | 15550.5 |
| fructose-1-phosphate/6-phosphogluconate phosphatase | DN590_04240 | Not Available | Negative | 875446 - 876012 | 20808.0 |
| Trna-arg | Not Available | Not Available | Positive | 876320 - 876396 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 876568 - 876644 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 876836 - 876912 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 876973 - 877049 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 877053 - 877145 | Not Available |
| carbon storage regulator | DN590_04270 | Not Available | Negative | 877482 - 877667 | 6856.34 |
| alanine--trna ligase | DN590_04275 | Not Available | Negative | 877906 - 880533 | 95605.3 |
| recombination regulator recx | DN590_04280 | Not Available | Negative | 880662 - 881162 | 19517.3 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

