Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trans-aconitate 2-methyltransferase | DN590_03875 | Not Available | Negative | 798406 - 799164 | 28862.9 |
| gnat family n-acetyltransferase | DN590_03880 | Not Available | Positive | 799275 - 799796 | 19677.6 |
| hypothetical protein | DN590_03885 | Not Available | Negative | 799899 - 800276 | 14190.0 |
| is5-like element is903b family transposase | DN590_03890 | Not Available | Negative | 801052 - 801975 | 34975.1 |
| hypothetical protein | DN590_03895 | Not Available | Positive | 802095 - 802727 | 24812.4 |
| isncy-like element iskpn21 family transposase | DN590_03900 | Not Available | Negative | 802756 - 804159 | 53501.2 |
| hypothetical protein | DN590_03905 | Not Available | Positive | 804970 - 806157 | 45642.8 |
| mfs transporter | DN590_03910 | Not Available | Negative | 806246 - 807532 | 46217.1 |
| d-aminoacylase | DN590_03915 | Not Available | Negative | 807611 - 809203 | 58162.0 |
| ygey family selenium metabolism-linked hydrolase | DN590_03920 | Not Available | Negative | 809271 - 810455 | 43117.0 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

