Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transporter | DN590_03825 | Not Available | Negative | 787790 - 788986 | 42564.7 |
| lysr family transcriptional regulator | DN590_03830 | Not Available | Negative | 789209 - 790084 | 32490.0 |
| succinate-semialdehyde dehydrogenase | DN590_03835 | Not Available | Positive | 790187 - 791575 | 49010.6 |
| methyl-accepting chemotaxis protein | DN590_03840 | Not Available | Positive | 791679 - 793256 | 57741.1 |
| glutaminase | DN590_03845 | Not Available | Positive | 793319 - 794245 | 33571.6 |
| duf4186 domain-containing protein | DN590_03850 | Not Available | Positive | 794245 - 794604 | 13546.5 |
| gnat family n-acetyltransferase | DN590_03855 | Not Available | Positive | 794685 - 795212 | 19151.2 |
| tagaturonate reductase | DN590_03860 | Not Available | Positive | 795319 - 796770 | 54493.0 |
| hypothetical protein | DN590_03865 | Not Available | Positive | 796986 - 797900 | 34793.0 |
| gfa family protein | DN590_03870 | Not Available | Negative | 797897 - 798274 | 13621.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

