Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | DN590_03775 | Not Available | Positive | 779229 - 780803 | 56567.4 |
| urea abc transporter permease subunit urtc | DN590_03780 | Not Available | Positive | 780803 - 781876 | 38826.1 |
| urea abc transporter atp-binding protein urtd | DN590_03785 | Not Available | Positive | 781876 - 782673 | 29457.5 |
| urea abc transporter atp-binding subunit urte | DN590_03790 | Not Available | Positive | 782683 - 783381 | 25583.2 |
| transporter | DN590_03795 | Not Available | Negative | 783422 - 784609 | 42437.0 |
| o-acetylserine/cysteine exporter | DN590_03800 | Not Available | Positive | 784808 - 785707 | 32043.9 |
| multiple antibiotic resistance protein marb | DN590_03805 | Not Available | Negative | 785738 - 785956 | 7956.53 |
| mdr efflux pump acrab transcriptional activator mara | DN590_03810 | Not Available | Negative | 785987 - 786376 | 15394.4 |
| multiple antibiotic resistance transcriptional regulator marr | DN590_03815 | Not Available | Negative | 786389 - 786823 | 16282.2 |
| stress protection protein marc | DN590_03820 | Not Available | Positive | 787081 - 787746 | 23566.7 |
Pathways
1346 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

