Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DN590_03720 | Not Available | Positive | 768351 - 769685 | 48408.7 |
| d-mannonate oxidoreductase | DN590_03725 | Not Available | Positive | 769847 - 771313 | 53803.8 |
| putative selenium delivery protein ydfz | DN590_03730 | Not Available | Negative | 771388 - 771591 | 7373.9 |
| gntr family transcriptional regulator | DN590_03735 | Not Available | Negative | 771783 - 772469 | 26469.7 |
| bifunctional nadp-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase ydfg | DN590_03740 | Not Available | Negative | 772556 - 773302 | 27306.6 |
| peptidyl-dipeptidase dcp | DN590_03745 | Not Available | Positive | 773440 - 775485 | 77407.3 |
| hypothetical protein | DN590_03750 | Not Available | Positive | 775764 - 775964 | 7392.62 |
| diguanylate cyclase | DN590_03755 | Not Available | Positive | 776120 - 777046 | 35219.2 |
| hypothetical protein | DN590_03765 | Not Available | Negative | 777332 - 777427 | 3551.41 |
| urea abc transporter substrate-binding protein | DN590_03770 | Not Available | Positive | 777914 - 779185 | 45906.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

