Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tat proofreading chaperone dmsd | DN590_03670 | Not Available | Negative | 759696 - 760310 | 23439.6 |
| dimethylsulfoxide reductase | DN590_03675 | Not Available | Negative | 760353 - 761207 | 30381.4 |
| dimethylsulfoxide reductase subunit b | DN590_03680 | Not Available | Negative | 761209 - 761826 | 22702.9 |
| dimethyl sulfoxide reductase subunit a | DN590_03685 | Not Available | Negative | 761837 - 764275 | 89989.0 |
| duf1161 domain-containing protein | DN590_03690 | Not Available | Negative | 764424 - 764732 | 10726.6 |
| ynfc family lipoprotein | DN590_03695 | Not Available | Positive | 764799 - 765545 | 27620.8 |
| spermidine n1-acetyltransferase | DN590_03700 | Not Available | Negative | 765552 - 766112 | 21810.2 |
| duf1283 family protein | DN590_03705 | Not Available | Negative | 766148 - 766489 | 12860.2 |
| ynfa family protein | DN590_03710 | Not Available | Positive | 766643 - 766969 | 11817.0 |
| d-galactonate dehydratase family protein | DN590_03715 | Not Available | Positive | 767076 - 768290 | 45825.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

