Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-methionine-sulfoxide reductase heme-binding subunit msrq | DN590_03620 | Not Available | Negative | 749007 - 749633 | 23648.1 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | DN590_03625 | Not Available | Negative | 749634 - 750638 | 37568.0 |
| dna-binding response regulator | DN590_03630 | Not Available | Positive | 750828 - 751550 | 27328.1 |
| two-component sensor histidine kinase | DN590_03635 | Not Available | Positive | 751547 - 753037 | 55429.5 |
| cpbp family intramembrane metalloprotease | DN590_03640 | Not Available | Positive | 753181 - 753867 | 25843.6 |
| mfs transporter | DN590_03645 | Not Available | Negative | 753901 - 755154 | 45014.9 |
| lysr family transcriptional regulator | DN590_03650 | Not Available | Positive | 755262 - 756161 | 33337.6 |
| rok family transcriptional regulator | DN590_03655 | Not Available | Positive | 756290 - 757510 | 44104.6 |
| atp-dependent dethiobiotin synthetase biod | DN590_03660 | Not Available | Positive | 757636 - 758331 | 24688.0 |
| voltage-gated clc-type chloride channel clcb | DN590_03665 | Not Available | Negative | 758287 - 759576 | 45323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

