Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain GEO_16_Eff_A |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1321210 bp
Thymine Count
1313182 bp
Guanine Count
1404681 bp
Cytosine Count
1426347 bp
Genome Length
5465420 bp
Protein-coding Genes
5038 genes
Non-Coding Genes
330 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ren protein | DN590_12340 | Not Available | Negative | 2505861 - 2506172 | 11625.4 |
| Hypothetical protein | DN590_12345 | Not Available | Negative | 2506175 - 2506927 | 27595.8 |
| Replication protein 14 | DN590_12350 | Not Available | Negative | 2506939 - 2507631 | 26611.9 |
| Dna replication protein o | DN590_12355 | Not Available | Negative | 2507615 - 2508607 | 37418.7 |
| Cii protein | DN590_12360 | Not Available | Negative | 2509051 - 2509590 | 20348.5 |
| Cro | DN590_12365 | Not Available | Negative | 2509630 - 2509839 | 7472.05 |
| Repressor protein | DN590_12370 | Not Available | Positive | 2509982 - 2510650 | 24779.3 |
| Hypothetical protein | DN590_12375 | Not Available | Positive | 2510672 - 2511826 | 44064.0 |
| Kil protein | DN590_12380 | Not Available | Positive | 2512176 - 2512382 | 7603.14 |
| Rece | DN590_12385 | Not Available | Positive | 2512695 - 2515523 | 105171.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

