Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain R47 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
12293 bp
Thymine Count
12398 bp
Guanine Count
14603 bp
Cytosine Count
14670 bp
Genome Length
53964 bp
Protein-coding Genes
69 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | FGF61_RS01980 | Not Available | Negative | 25177 - 25956 | 28592.1 |
| hypothetical protein | FGF61_RS01985 | Not Available | Negative | 25953 - 26774 | 32280.2 |
| hypothetical protein | FGF61_RS01990 | Not Available | Negative | 26829 - 27128 | 11422.4 |
| hypothetical protein | FGF61_RS01995 | Not Available | Negative | 27333 - 27746 | 15409.8 |
| type ii toxin-antitoxin system vapb family antitoxin | FGF61_RS02000 | Not Available | Positive | 27703 - 27933 | 8757.31 |
| type ii toxin-antitoxin system vapc family toxin | FGF61_RS02005 | Not Available | Positive | 27930 - 28346 | 15124.5 |
| helix-turn-helix domain-containing protein | FGF61_RS02010 | Not Available | Positive | 28420 - 28638 | 8323.15 |
| is6-like element is26 family transposase | FGF61_RS02015 | Not Available | Positive | 28703 - 29407 | 27896.9 |
| c2h2-type zinc finger protein | FGF61_RS02025 | Not Available | Positive | 29819 - 30145 | 12489.2 |
| helix-turn-helix domain-containing protein | FGF61_RS02035 | Not Available | Negative | 30938 - 31294 | 13260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

