Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Citrobacter |
| Species | Citrobacter freundii |
| Strain | strain R47 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | hospital sewage; intestinal tract; sewage; soil; surface waters |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Metazoa, Oryctolagus cuniculus |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
12293 bp
Thymine Count
12398 bp
Guanine Count
14603 bp
Cytosine Count
14670 bp
Genome Length
53964 bp
Protein-coding Genes
69 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FGF61_RS01610 | Not Available | Negative | 260032 - 261084 | 39348.9 |
| repb family plasmid replication initiator protein | FGF61_RS01615 | Not Available | Positive | 261561 - 262436 | 33224.4 |
| hypothetical protein | FGF61_RS01625 | Not Available | Positive | 263585 - 263938 | 12331.5 |
| type iv conjugative transfer system protein tral | FGF61_RS01630 | Not Available | Positive | 263956 - 264306 | 13420.6 |
| trae/trak family type iv conjugative transfer system protein | FGF61_RS01635 | Not Available | Positive | 264318 - 265106 | 29314.2 |
| type-f conjugative transfer system secretin trak | FGF61_RS01640 | Not Available | Positive | 265106 - 266377 | 45288.6 |
| plasmid transfer protein htdo | FGF61_RS01645 | Not Available | Positive | 266379 - 266840 | 17163.4 |
| inchi-type conjugal transfer protein trhb | FGF61_RS01650 | Not Available | Positive | 266830 - 268185 | 48515.8 |
| hypothetical protein | FGF61_RS01655 | Not Available | Positive | 268193 - 268675 | 18754.5 |
| protein-disulfide isomerase htdt | FGF61_RS01660 | Not Available | Positive | 268794 - 269546 | 27847.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Infections in animals | Causes | PMC6885840 |
| Infections of the urinary and respiratory tracts in humans | Causes | PMC6885840 |
| Respiratory tract and wound infections in horses | Causes | PMC6885840 |
| Respiratory tract infections in dogs | Causes | PMC6885840 |
| Pleuritis and urinary tract infections in cats | Causes | PMC6885840 |
| Bacterial infections | Causes | PMC7578172 |
| Opportunistic infections | Causes | PMC12838003 |

