Citrobacter freundii strain UMH14

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain UMH14 is a gram-negative, rod-shaped bacterium characterized as a facultative anaerobe with true flagella. This strain has been found in diverse habitats, including hospital sewage, intestinal tracts, various sewage systems, soil, and surface waters. Its broad distribution suggests a significant ecological role in both natural and anthropogenic environments. The strain has a single replicon and is associated with multiple hosts, including Homo sapiens, various metazoans, and domesticated animals such as dogs (Canis lupus familiaris) and cats (Felis catus). It is also found in aquatic species like tilapia (Oryctolagus cuniculus) and cyprinids, indicating its adaptability across different ecological niches. Citrobacter freundii is known for its role as an opportunistic pathogen, leading to infections in humans and animals. It is implicated in urinary and respiratory tract infections in humans, as well as respiratory tract and wound infections in horses and dogs. Cats can also experience pleuritis and urinary tract infections associated with this bacterium. These health effects highlight its potential to impact both veterinary and human health, particularly in immunocompromised individuals or those with pre-existing conditions. The presence of Citrobacter freundii strain UMH14 in hospital sewage underscores its relevance in healthcare settings, where it may pose risks of nosocomial infections. Furthermore, its ability to thrive in various environments and hosts reflects its ecological versatility, making it an important bacterium for studying microbial dynamics in both clinical and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
Strainstrain UMH14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii strain UMH14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain UMH14


Gene Summary

Adenine Count

15943 bp

Thymine Count

15743 bp

Guanine Count

19927 bp

Cytosine Count

19661 bp

Genome Length

71274 bp

Protein-coding Genes

79 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mercuric ion transporter mertCUC46_RS24760Not AvailableNegative54473 - 5483813095.4
hg(ii)-responsive transcriptional regulatorCUC46_RS24765Not AvailablePositive54910 - 5536516529.9
plasmid replication initiator repaCUC46_RS24770Not AvailableNegative56577 - 5751836376.6
repa leader peptide tapCUC46_RS24775Not AvailableNegative57511 - 575882904.76
trai domain proteinCUC46_RS25400Not AvailablePositive57675 - 577823787.57
replication regulatory protein repaCUC46_RS24780Not AvailableNegative57833 - 580698806.57
trai domain proteinCUC46_RS24785Not AvailableNegative58200 - 583676376.13
trai domain proteinCUC46_RS24790Not AvailableNegative58367 - 5904125147.1
hypothetical proteinCUC46_RS24795Not AvailableNegative59240 - 594196103.05
sos response-associated peptidase family proteinCUC46_RS24800Not AvailablePositive59410 - 6009025770.3

Displaying genes 61 – 70 of 79 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infections in animalsCausesPMC6885840
Infections of the urinary and respiratory tracts in humansCausesPMC6885840
Respiratory tract and wound infections in horsesCausesPMC6885840
Respiratory tract infections in dogsCausesPMC6885840
Pleuritis and urinary tract infections in catsCausesPMC6885840
Bacterial infectionsCausesPMC7578172
Opportunistic infectionsCausesPMC12838003

Displaying health effects 1 – 7 of 7 in total