Citrobacter freundii strain UMH14

Gram-negativeRodFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter freundii strain UMH14 is a gram-negative, rod-shaped bacterium characterized as a facultative anaerobe with true flagella. This strain has been found in diverse habitats, including hospital sewage, intestinal tracts, various sewage systems, soil, and surface waters. Its broad distribution suggests a significant ecological role in both natural and anthropogenic environments. The strain has a single replicon and is associated with multiple hosts, including Homo sapiens, various metazoans, and domesticated animals such as dogs (Canis lupus familiaris) and cats (Felis catus). It is also found in aquatic species like tilapia (Oryctolagus cuniculus) and cyprinids, indicating its adaptability across different ecological niches. Citrobacter freundii is known for its role as an opportunistic pathogen, leading to infections in humans and animals. It is implicated in urinary and respiratory tract infections in humans, as well as respiratory tract and wound infections in horses and dogs. Cats can also experience pleuritis and urinary tract infections associated with this bacterium. These health effects highlight its potential to impact both veterinary and human health, particularly in immunocompromised individuals or those with pre-existing conditions. The presence of Citrobacter freundii strain UMH14 in hospital sewage underscores its relevance in healthcare settings, where it may pose risks of nosocomial infections. Furthermore, its ability to thrive in various environments and hosts reflects its ecological versatility, making it an important bacterium for studying microbial dynamics in both clinical and environmental contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter freundii
Strainstrain UMH14

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Citrobacter freundii strain UMH14
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitathospital sewage; intestinal tract; sewage; soil; surface waters
Biotic relationshipNot Available
Host(s)Homo sapiens, Metazoa, Oryctolagus cuniculus
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Citrobacter freundii strain UMH14


Gene Summary

Adenine Count

15943 bp

Thymine Count

15743 bp

Guanine Count

19927 bp

Cytosine Count

19661 bp

Genome Length

71274 bp

Protein-coding Genes

79 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trai domain proteinCUC46_RS24440Not AvailablePositive534 - 88812620.1
efflux rnd transporter periplasmic adaptor subunitCUC46_RS24445Not AvailablePositive980 - 227247813.3
trai domain proteinCUC46_RS24450Not AvailablePositive2283 - 5428114929.0
duf411 domain-containing proteinCUC46_RS24455Not AvailablePositive5515 - 595515508.9
ag(+)-translocating p-type atpase silpCUC46_RS24460Not AvailablePositive6074 - 852787000.8
duf2933 domain-containing proteinCUC46_RS24465Not AvailablePositive8558 - 87557326.87
peptidoglycan dd-metalloendopeptidase family proteinCUC46_RS24470Not AvailableNegative8786 - 952627215.4
hypothetical proteinCUC46_RS24475Not AvailableNegative9810 - 1025616395.3
multicopper oxidase pcoaCUC46_RS24485Not AvailablePositive10491 - 1230867309.2
copper resistance protein bCUC46_RS24490Not AvailablePositive12314 - 1320132426.0

Displaying genes 1 – 10 of 79 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Infections in animalsCausesPMC6885840
Infections of the urinary and respiratory tracts in humansCausesPMC6885840
Respiratory tract and wound infections in horsesCausesPMC6885840
Respiratory tract infections in dogsCausesPMC6885840
Pleuritis and urinary tract infections in catsCausesPMC6885840
Bacterial infectionsCausesPMC7578172
Opportunistic infectionsCausesPMC12838003

Displaying health effects 1 – 7 of 7 in total